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MELLADRAFT_50486 family 3 glycosyltransferase [ Melampsora larici-populina 98AG31 ]

Gene ID: 18928708, updated on 18-Sep-2024

Summary

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Gene symbol
MELLADRAFT_50486
Gene description
family 3 glycosyltransferase
Locus tag
MELLADRAFT_50486
See related
FungiDB:MELLADRAFT_50486; VEuPathDB:MELLADRAFT_50486
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Melampsora larici-populina 98AG31 (strain: 98AG31)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Melampsoraceae; Melampsora
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Genomic context

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See MELLADRAFT_50486 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
10

NW_006768825.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006768825.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
family 3 glycosyltransferase
XP_007416527.1
  • candidate glycogen synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006768825.1 Reference assembly

    Range
    187954..191199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007416465.1 → XP_007416527.1  family 3 glycosyltransferase [Melampsora larici-populina 98AG31]

    See identical proteins and their annotated locations for XP_007416527.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F4S591
    Conserved Domains (2) summary
    cd03793
    Location:11 → 605
    GT1_Glycogen_synthase_GSY2_like; Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the ...
    pfam05693
    Location:16 → 653
    Glycogen_syn; Glycogen synthase
Nucleotide Protein
Heading Accession and Version

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