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MELLADRAFT_48052 family 2 glycosyltransferase [ Melampsora larici-populina 98AG31 ]

Gene ID: 18928490, updated on 26-Jun-2024

Summary

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Gene symbol
MELLADRAFT_48052
Gene description
family 2 glycosyltransferase
Locus tag
MELLADRAFT_48052
See related
FungiDB:MELLADRAFT_48052; VEuPathDB:MELLADRAFT_48052
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Melampsora larici-populina 98AG31 (strain: 98AG31)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Melampsoraceae; Melampsora
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Genomic context

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See MELLADRAFT_48052 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
10

NW_006768778.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006768778.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytoskeletal motor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of myosin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
family 2 glycosyltransferase
XP_007409039.1
  • candidate chitin synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006768778.1 Reference assembly

    Range
    1506906..1514245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007408977.1 → XP_007409039.1  family 2 glycosyltransferase [Melampsora larici-populina 98AG31]

    See identical proteins and their annotated locations for XP_007409039.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F4RJ63
    Conserved Domains (5) summary
    cd14879
    Location:51 → 832
    MYSc_Myo17; class XVII myosin, motor domain
    pfam00173
    Location:1047 → 1108
    Cyt-b5; Cytochrome b5-like Heme/Steroid binding domain
    pfam03142
    Location:1294 → 1801
    Chitin_synth_2; Chitin synthase
    pfam08766
    Location:1976 → 2027
    DEK_C; DEK C terminal domain
    cl11394
    Location:1434 → 1652
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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