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MELLADRAFT_42252 family 2 glycosyltransferase [ Melampsora larici-populina 98AG31 ]

Gene ID: 18928039, updated on 26-Jun-2024

Summary

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Gene symbol
MELLADRAFT_42252
Gene description
family 2 glycosyltransferase
Locus tag
MELLADRAFT_42252
See related
FungiDB:MELLADRAFT_42252; VEuPathDB:MELLADRAFT_42252
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Melampsora larici-populina 98AG31 (strain: 98AG31)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Pucciniomycotina; Pucciniomycetes; Pucciniales; Melampsoraceae; Melampsora
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Genomic context

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See MELLADRAFT_42252 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
17

NW_006768770.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006768770.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
family 2 glycosyltransferase
XP_007406341.1
  • candidate chitin-synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006768770.1 Reference assembly

    Range
    187675..192247
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007406279.1 → XP_007406341.1  family 2 glycosyltransferase [Melampsora larici-populina 98AG31]

    See identical proteins and their annotated locations for XP_007406341.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    F4RB90
    Conserved Domains (4) summary
    COG1215
    Location:336 → 754
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:226 → 387
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:154 → 224
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:385 → 541
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
Heading Accession and Version

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