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PHACADRAFT_258784 hypothetical protein [ Phanerochaete carnosa HHB-10118-sp ]

Gene ID: 18917210, updated on 14-Dec-2023

Summary

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Gene symbol
PHACADRAFT_258784
Gene description
hypothetical protein
Locus tag
PHACADRAFT_258784
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Phanerochaete carnosa HHB-10118-sp (strain: HHB-10118-sp)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Phanerochaetaceae; Phanerochaete
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Genomic context

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See PHACADRAFT_258784 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
7

NW_006767633.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006767633.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. Suzuki H, et al. BMC Genomics, 2012 Sep 2. PMID 22937793, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006767633.1 Reference assembly

    Range
    2834497..2835987 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007397362.1 → XP_007397424.1  uncharacterized protein PHACADRAFT_258784 [Phanerochaete carnosa HHB-10118-sp]

    See identical proteins and their annotated locations for XP_007397424.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K5VT96
    Conserved Domains (2) summary
    PTZ00169
    Location:8 → 288
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:4 → 92
    Mito_carr; Mitochondrial carrier protein
Protein Accession Links
GenPept Link UniProtKB Link
EKM54743.1

Gene LinkOut

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Molecular Biology Databases