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PHACADRAFT_201595 glycosyltransferase family 2 protein [ Phanerochaete carnosa HHB-10118-sp ]

Gene ID: 18911618, updated on 26-Jun-2024

Summary

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Gene symbol
PHACADRAFT_201595
Gene description
glycosyltransferase family 2 protein
Locus tag
PHACADRAFT_201595
Gene type
protein coding
RNA name
glycosyltransferase family 2 protein
RefSeq status
PROVISIONAL
Organism
Phanerochaete carnosa HHB-10118-sp (strain: HHB-10118-sp)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Polyporales; Phanerochaetaceae; Phanerochaete
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Genomic context

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See PHACADRAFT_201595 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
18

NW_006767640.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006767640.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of the white-rot fungi, Phanerochaete carnosa and P. chrysosporium, to elucidate the genetic basis of the distinct wood types they colonize. Suzuki H, et al. BMC Genomics, 2012 Sep 2. PMID 22937793, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase family 2 protein
XP_007401939.1
  • CAZy_ID 264528

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006767640.1 Reference assembly

    Range
    1403715..1407434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007401877.1 → XP_007401939.1  glycosyltransferase family 2 protein [Phanerochaete carnosa HHB-10118-sp]

    See identical proteins and their annotated locations for XP_007401939.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    K5VTK7
    Conserved Domains (4) summary
    COG1215
    Location:354 → 721
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:257 → 418
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:185 → 255
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:357 → 486
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Protein Accession Links
GenPept Link UniProtKB Link
EKM49889.1

Gene LinkOut

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Molecular Biology Databases