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TPS1 trehalose-6-phosphate synthase [ Spathaspora passalidarum NRRL Y-27907 ]

Gene ID: 18872955, updated on 30-Dec-2023

Summary

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Gene symbol
TPS1
Gene description
trehalose-6-phosphate synthase
Locus tag
SPAPADRAFT_59519
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Spathaspora passalidarum NRRL Y-27907 (strain: NRRL Y-27907, type-material: type material of Spathaspora passalidarum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Spathaspora
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Genomic context

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See TPS1 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_006767426.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene DNA-directed DNA polymerase epsilon, catalytic subunit A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006767426.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomics of xylose-fermenting fungi for enhanced biofuel production. Wohlbach DJ, et al. Proc Natl Acad Sci U S A, 2011 Aug 9. PMID 21788494, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to heat IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trehalose-6-phosphate synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006767426.1 Reference assembly

    Range
    953168..955968 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007373620.1 → XP_007373682.1  trehalose-6-phosphate synthase [Spathaspora passalidarum NRRL Y-27907]

    See identical proteins and their annotated locations for XP_007373682.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G3AHD4
    Conserved Domains (2) summary
    cd03788
    Location:9 → 472
    GT1_TPS; Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a ...
    pfam00982
    Location:8 → 472
    Glyco_transf_20; Glycosyltransferase family 20
Nucleotide Protein
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Gene LinkOut

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