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LOC18792200 endochitinase EP3 [ Prunus persica (peach) ]

Gene ID: 18792200, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18792200
Gene description
endochitinase EP3
Locus tag
PRUPE_1G080700
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC18792200 in Genome Data Viewer
Location:
chromosome: G1
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G1 NC_034009.1 (5921834..5923128)

Chromosome G1 - NC_034009.1Genomic Context describing neighboring genes Neighboring gene endochitinase EP3 Neighboring gene endochitinase EP3 Neighboring gene endochitinase PR4-like Neighboring gene 50S ribosomal protein L25

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034009.1 Chromosome G1 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell wall macromolecule catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endochitinase EP3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034009.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    5921834..5923128
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007226482.2 → XP_007226544.1  endochitinase EP3

    See identical proteins and their annotated locations for XP_007226544.1

    UniProtKB/TrEMBL
    M5Y0J0
    Conserved Domains (2) summary
    cd00035
    Location:34 → 62
    ChtBD1; Hevein or type 1 chitin binding domain
    cd00325
    Location:81 → 276
    chitinase_glyco_hydro_19; Glycoside hydrolase family 19 chitinase domain. Chitinases are enzymes that catalyze the hydrolysis of the beta-1,4-N-acetyl-D-glucosamine linkages in chitin polymers. Family 19 chitinases are found primarily in plants (classes I, III, and IV), but some ...
Nucleotide Protein Strain
Heading Accession and Version

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