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LOC18790062 major allergen Pru av 1 [ Prunus persica (peach) ]

Gene ID: 18790062, updated on 18-Sep-2024

Summary

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Gene symbol
LOC18790062
Gene description
major allergen Pru av 1
Locus tag
PRUPE_1G128700
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Also known as
PR10; ypr-10
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Genomic context

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See LOC18790062 in Genome Data Viewer
Location:
chromosome: G1
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G1 NC_034009.1 (10045829..10047018)

Chromosome G1 - NC_034009.1Genomic Context describing neighboring genes Neighboring gene major allergen Pru ar 1-like Neighboring gene major allergen Pru ar 1 Neighboring gene major allergen Pru ar 1 Neighboring gene major allergen Pru ar 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034009.1 Chromosome G1 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Purification and structural stability of the peach allergens Pru p 1 and Pru p 3. Gaier S, et al. Mol Nutr Food Res, 2008 Nov. PMID 18384093
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables abscisic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in abscisic acid-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
major allergen Pru av 1
Names
major allergen Pru p 1
pathogenesis related protein PR10
pru p 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034009.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    10045829..10047018
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007223574.2 → XP_007223636.1  major allergen Pru av 1

    See identical proteins and their annotated locations for XP_007223636.1

    UniProtKB/TrEMBL
    Q2I6V8
    Conserved Domains (1) summary
    cd07816
    Location:4 → 152
    Bet_v1-like; Ligand-binding bet_v_1 domain of major pollen allergen of white birch (Betula verrucosa), Bet v 1, and related proteins
Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases