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LOC18789659 heat shock protein 90-5, chloroplastic [ Prunus persica (peach) ]

Gene ID: 18789659, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18789659
Gene description
heat shock protein 90-5, chloroplastic
Locus tag
PRUPE_1G295600
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC18789659 in Genome Data Viewer
Location:
chromosome: G1
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G1 NC_034009.1 (29232510..29238640)

Chromosome G1 - NC_034009.1Genomic Context describing neighboring genes Neighboring gene UDP-glycosyltransferase 89A2 Neighboring gene protein ABHD17B Neighboring gene DNA-directed RNA polymerase 1, mitochondrial Neighboring gene probable sodium-coupled neutral amino acid transporter 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034009.1 Chromosome G1 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Small RNAs containing the pathogenic determinant of a chloroplast-replicating viroid guide the degradation of a host mRNA as predicted by RNA silencing. Navarro B, et al. Plant J, 2012 Jun. PMID 22332758

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to heat IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein stabilization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of protein-containing complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heat shock protein 90-5, chloroplastic
Names
chloroplast heat shock protein 90

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034009.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    29232510..29238640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007225602.2 → XP_007225664.1  heat shock protein 90-5, chloroplastic

    See identical proteins and their annotated locations for XP_007225664.1

    UniProtKB/TrEMBL
    M5XYH1
    Conserved Domains (1) summary
    PRK05218
    Location:83 → 746
    PRK05218; heat shock protein 90; Provisional
Nucleotide Protein Strain
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