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LOC18789459 elongation factor 1-alpha [ Prunus persica (peach) ]

Gene ID: 18789459, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18789459
Gene description
elongation factor 1-alpha
Locus tag
PRUPE_1G010400
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus persica
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Also known as
eEF1A
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Genomic context

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See LOC18789459 in Genome Data Viewer
Location:
chromosome: G1
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Prunus_persica_NCBIv2 (GCF_000346465.2) G1 NC_034009.1 (792842..795854, complement)

Chromosome G1 - NC_034009.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109948330 Neighboring gene UV radiation resistance associated protein Neighboring gene UBX domain-containing protein 4 Neighboring gene putative F-box/LRR-repeat protein 23

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034009.1 Chromosome G1 Reference Prunus_persica_NCBIv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of proteins from prunus persica that interact with peach latent mosaic viroid. Dubé A, et al. J Virol, 2009 Dec. PMID 19759139, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 1-alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus persica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Prunus_persica_NCBIv2 Primary Assembly

Genomic

  1. NC_034009.1 Reference Prunus_persica_NCBIv2 Primary Assembly

    Range
    792842..795854 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007222067.2 → XP_007222129.1  elongation factor 1-alpha

    See identical proteins and their annotated locations for XP_007222129.1

    UniProtKB/TrEMBL
    B6V864, M5XP84
    Conserved Domains (1) summary
    PTZ00141
    Location:1 → 446
    PTZ00141; elongation factor 1- alpha; Provisional
Nucleotide Protein Strain
Heading Accession and Version

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