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FOMMEDRAFT_89481 nucleotide-diphospho-sugar transferase [ Fomitiporia mediterranea MF3/22 ]

Gene ID: 18680494, updated on 14-Dec-2023

Summary

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Gene symbol
FOMMEDRAFT_89481
Gene description
nucleotide-diphospho-sugar transferase
Locus tag
FOMMEDRAFT_89481
Gene type
protein coding
RNA name
nucleotide-diphospho-sugar transferase
RefSeq status
PROVISIONAL
Organism
Fomitiporia mediterranea MF3/22 (strain: MF3/22)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Hymenochaetales; Hymenochaetaceae; Fomitiporia
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Genomic context

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See FOMMEDRAFT_89481 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_006760393.1Genomic Context describing neighboring genes Neighboring gene nucleotide-diphospho-sugar transferase Neighboring gene DUF962-domain-containing protein Neighboring gene eukaryotic translation initiation factor 2B delta subunit Neighboring gene Pentulose kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006760393.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleotide-diphospho-sugar transferase
XP_007268166.1
  • CAZy_ID 264585

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006760393.1 Reference assembly

    Range
    836386..837183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007268104.1 → XP_007268166.1  nucleotide-diphospho-sugar transferase, partial [Fomitiporia mediterranea MF3/22]

    See identical proteins and their annotated locations for XP_007268166.1

    Status: PROVISIONAL

    Conserved Domains (2) summary
    COG1442
    Location:87 → 259
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
    cl11394
    Location:13 → 260
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Protein Accession Links
GenPept Link UniProtKB Link
EJD00889.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases