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FOMMEDRAFT_86578 glucan synthase [ Fomitiporia mediterranea MF3/22 ]

Gene ID: 18680327, updated on 14-Dec-2023

Summary

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Gene symbol
FOMMEDRAFT_86578
Gene description
glucan synthase
Locus tag
FOMMEDRAFT_86578
Gene type
protein coding
RNA name
glucan synthase
RefSeq status
PROVISIONAL
Organism
Fomitiporia mediterranea MF3/22 (strain: MF3/22)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Hymenochaetales; Hymenochaetaceae; Fomitiporia
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Genomic context

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See FOMMEDRAFT_86578 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_006760392.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene mis5 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006760392.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fungal-type cell wall polysaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glucan synthase
XP_007267344.1
  • CAZy_ID 264050

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006760392.1 Reference assembly

    Range
    560744..566151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007267282.1 → XP_007267344.1  glucan synthase [Fomitiporia mediterranea MF3/22]

    See identical proteins and their annotated locations for XP_007267344.1

    Status: PROVISIONAL

    Conserved Domains (2) summary
    pfam02364
    Location:700 → 1523
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam14288
    Location:196 → 303
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Protein Accession Links
GenPept Link UniProtKB Link
EJD01928.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases