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FOMMEDRAFT_84790 glycosyltransferase family 2 protein [ Fomitiporia mediterranea MF3/22 ]

Gene ID: 18680227, updated on 26-Jun-2024

Summary

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Gene symbol
FOMMEDRAFT_84790
Gene description
glycosyltransferase family 2 protein
Locus tag
FOMMEDRAFT_84790
Gene type
protein coding
RNA name
glycosyltransferase family 2 protein
RefSeq status
PROVISIONAL
Organism
Fomitiporia mediterranea MF3/22 (strain: MF3/22)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Hymenochaetales; Hymenochaetaceae; Fomitiporia
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Genomic context

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See FOMMEDRAFT_84790 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
18

NW_006760391.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene tetrapyrrole biosynthesis, porphobilinogen synthase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006760391.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycosyltransferase family 2 protein
XP_007266620.1
  • CAZy_ID 264028

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006760391.1 Reference assembly

    Range
    1900337..1903495 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007266558.1 → XP_007266620.1  glycosyltransferase family 2 protein [Fomitiporia mediterranea MF3/22]

    See identical proteins and their annotated locations for XP_007266620.1

    Status: PROVISIONAL

    Conserved Domains (4) summary
    COG1215
    Location:202 → 523
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:91 → 253
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:23 → 89
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:258 → 456
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Protein Accession Links
GenPept Link UniProtKB Link
EJD02909.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases