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FOMMEDRAFT_31885 hypothetical protein [ Fomitiporia mediterranea MF3/22 ]

Gene ID: 18679153, updated on 26-Jun-2024

Summary

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Gene symbol
FOMMEDRAFT_31885
Gene description
hypothetical protein
Locus tag
FOMMEDRAFT_31885
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Fomitiporia mediterranea MF3/22 (strain: MF3/22)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Hymenochaetales; Hymenochaetaceae; Fomitiporia
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Genomic context

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See FOMMEDRAFT_31885 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
16

NW_006760401.1Genomic Context describing neighboring genes Neighboring gene AAA-domain-containing protein Neighboring gene tRNA-Pro Neighboring gene glycosyltransferase family 2 protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006760401.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_007271243.1
  • CAZy_ID 264140

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006760401.1 Reference assembly

    Range
    931328..935081 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007271181.1 → XP_007271243.1  uncharacterized protein FOMMEDRAFT_31885 [Fomitiporia mediterranea MF3/22]

    See identical proteins and their annotated locations for XP_007271243.1

    Status: PROVISIONAL

    Conserved Domains (4) summary
    COG1215
    Location:187 → 504
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam01644
    Location:75 → 238
    Chitin_synth_1; Chitin synthase
    pfam08407
    Location:3 → 73
    Chitin_synth_1N; Chitin synthase N-terminal
    cl11394
    Location:264 → 426
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Protein Accession Links
GenPept Link UniProtKB Link
EJC98438.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases