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FOMMEDRAFT_171561 hypothetical protein [ Fomitiporia mediterranea MF3/22 ]

Gene ID: 18677348, updated on 25-Jan-2024

Summary

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Gene symbol
FOMMEDRAFT_171561
Gene description
hypothetical protein
Locus tag
FOMMEDRAFT_171561
Gene type
protein coding
RNA name
uncharacterized protein
RefSeq status
PROVISIONAL
Organism
Fomitiporia mediterranea MF3/22 (strain: MF3/22)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Hymenochaetales; Hymenochaetaceae; Fomitiporia
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Genomic context

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See FOMMEDRAFT_171561 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
29

NW_006760405.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene plasma-membrane proton-e Neighboring gene hypothetical protein Neighboring gene SAICAR synthase-like protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006760405.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucose:glycoprotein glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation via asparagine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_007272047.1
  • CAZy_ID 264602

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006760405.1 Reference assembly

    Range
    27439..34282 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007271985.1 → XP_007272047.1  uncharacterized protein FOMMEDRAFT_171561 [Fomitiporia mediterranea MF3/22]

    See identical proteins and their annotated locations for XP_007272047.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    R7SH37
    Conserved Domains (2) summary
    cd06432
    Location:1334 → 1581
    GT8_HUGT1_C_like; The C-terminal domain of HUGT1-like is highly homologous to the GT 8 family
    pfam06427
    Location:33 → 1285
    UDP-g_GGTase; UDP-glucose:Glycoprotein Glucosyltransferase
Protein Accession Links
GenPept Link UniProtKB Link
EJC97612.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases