U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

FOMMEDRAFT_110719 chitin synthase [ Fomitiporia mediterranea MF3/22 ]

Gene ID: 18670524, updated on 26-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
FOMMEDRAFT_110719
Gene description
chitin synthase
Locus tag
FOMMEDRAFT_110719
Gene type
protein coding
RNA name
chitin synthase
RefSeq status
PROVISIONAL
Organism
Fomitiporia mediterranea MF3/22 (strain: MF3/22)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Hymenochaetales; Hymenochaetaceae; Fomitiporia
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See FOMMEDRAFT_110719 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
12

NW_006760393.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene cleft lip and palate transmembrane 1 Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006760393.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
chitin synthase
XP_007268423.1
  • CAZy_ID 264075

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006760393.1 Reference assembly

    Range
    1538865..1542717
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007268361.1 → XP_007268423.1  chitin synthase [Fomitiporia mediterranea MF3/22]

    See identical proteins and their annotated locations for XP_007268423.1

    Status: PROVISIONAL

    Conserved Domains (3) summary
    cd04190
    Location:199 → 532
    Chitin_synth_C; C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin
    COG1215
    Location:302 → 660
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
    pfam08407
    Location:129 → 202
    Chitin_synth_1N; Chitin synthase N-terminal
Protein Accession Links
GenPept Link UniProtKB Link
EJD01146.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases