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F58A6.1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [ Caenorhabditis elegans ]

Gene ID: 186486, updated on 18-Sep-2024

Summary

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Official Symbol
F58A6.1
Official Full Name
Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
Primary source
WormBase:WBGene00019022
Locus tag
CELE_F58A6.1
See related
AllianceGenome:WB:WBGene00019022
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable delta3,5-delta2,4-dienoyl-CoA isomerase activity. Predicted to be active in mitochondrion. Orthologous to human ECH1 (enoyl-CoA hydratase 1). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See F58A6.1 in Genome Data Viewer
Location:
chromosome: II
Exon count:
5
Sequence:
Chromosome: II; NC_003280.10 (5142919..5144021)

Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene Transmembrane protein Neighboring gene Zinc metalloproteinase nas-29 Neighboring gene ncRNA Neighboring gene Uncharacterized protein Neighboring gene Serpentine receptor class beta-16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003280.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables delta(3,5)-delta(2,4)-dienoyl-CoA isomerase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables isomerase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
  
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial
NP_494954.1
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003280.10 Reference assembly

    Range
    5142919..5144021
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_062553.7 → NP_494954.1  Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_494954.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20959
    Conserved Domains (1) summary
    cl23717
    Location:1 → 275
    crotonase-like; Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. ...
Nucleotide Protein
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