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PHAVU_001G148700g hypothetical protein [ Phaseolus vulgaris ]

Gene ID: 18641451, updated on 28-Dec-2023

Summary

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Gene symbol
PHAVU_001G148700g
Gene description
hypothetical protein
Locus tag
PHAVU_001G148700g
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Phaseolus vulgaris (cultivar: G19833)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Sequence:
Chromosome: 1; NC_023759.1 (40199619..40202216, complement)

Chromosome 1 - NC_023759.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023759.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Differential chain-length specificities of two isoamylase-type starch-debranching enzymes from developing seeds of kidney bean. Takashima Y, et al. Biosci Biotechnol Biochem, 2007 Sep. PMID 17827690

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables isoamylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in starch biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_007162398.1
  • encoded by transcript PHAVU_001G1487001m

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_023759.1 Reference assembly

    Range
    40199619..40202216 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007162336.1 → XP_007162398.1  hypothetical protein PHAVU_001G148700g [Phaseolus vulgaris]

    See identical proteins and their annotated locations for XP_007162398.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A4PIS9
    Conserved Domains (3) summary
    cd02856
    Location:221 → 359
    E_set_GDE_Isoamylase_N; N-terminal Early set domain associated with the catalytic domain of Glycogen debranching enzyme and bacterial isoamylase (also called glycogen 6-glucanohydrolase)
    cd11346
    Location:351 → 739
    AmyAc_plant_IsoA; Alpha amylase catalytic domain family found in plant isoamylases
    COG1523
    Location:216 → 826
    PulA; Pullulanase/glycogen debranching enzyme [Carbohydrate transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
ESW34392.1

Gene LinkOut

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Molecular Biology Databases