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PHAVU_003G014400g hypothetical protein [ Phaseolus vulgaris ]

Gene ID: 18633561, updated on 28-Dec-2023

Summary

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Gene symbol
PHAVU_003G014400g
Gene description
hypothetical protein
Locus tag
PHAVU_003G014400g
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Phaseolus vulgaris (cultivar: G19833)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
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Genomic context

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Location:
chromosome: 3
Exon count:
4
Sequence:
Chromosome: 3; NC_023757.1 (1319859..1322713, complement)

Chromosome 3 - NC_023757.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023757.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xyloglucan:xyloglucosyl transferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in xyloglucan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell wall IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_007153190.1
  • encoded by transcript PHAVU_003G0144001m

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_023757.1 Reference assembly

    Range
    1319859..1322713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007153128.1 → XP_007153190.1  hypothetical protein PHAVU_003G014400g [Phaseolus vulgaris]

    See identical proteins and their annotated locations for XP_007153190.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    T2DNL8, U5U2M0, V7C4Z5
    Conserved Domains (1) summary
    cd02176
    Location:34 → 295
    GH16_XET; Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16
Protein Accession Links
GenPept Link UniProtKB Link
ESW25184.1

Gene LinkOut

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Molecular Biology Databases