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srh-16 Serpentine Receptor, class H [ Caenorhabditis elegans ]

Gene ID: 186287, updated on 18-Sep-2024

Summary

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Official Symbol
srh-16
Official Full Name
Serpentine Receptor, class H
Primary source
WormBase:WBGene00005241
Locus tag
CELE_F55C5.9
See related
AllianceGenome:WB:WBGene00005241
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See srh-16 in Genome Data Viewer
Location:
chromosome: V
Exon count:
8
Sequence:
Chromosome: V; NC_003283.11 (12291861..12294196)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene PX domain-containing protein Neighboring gene Signal recognition particle subunit SRP68 Neighboring gene ncRNA Neighboring gene ncRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses. Robertson HM. Genome Res, 2000 Feb. PMID 10673277
  2. Identification and characterization of novel nicotinic receptor-associated proteins in Caenorhabditis elegans. Gottschalk A, et al. EMBO J, 2005 Jul 20. PMID 15990870, Free PMC Article
  3. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Serpentine Receptor, class H
NP_506084.2
  • Confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    12291861..12294196
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_073683.3 → NP_506084.2  Serpentine Receptor, class H [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_506084.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q20814
    Conserved Domains (1) summary
    cl11665
    Location:13 → 314
    7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
Nucleotide Protein
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