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LOC18596813 mitochondrial arginine transporter BAC1 [ Theobroma cacao (cacao) ]

Gene ID: 18596813, updated on 9-Nov-2023

Summary

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Gene symbol
LOC18596813
Gene description
mitochondrial arginine transporter BAC1
Gene type
protein coding
RefSeq status
MODEL
Organism
Theobroma cacao
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Byttnerioideae; Theobroma
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Genomic context

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See LOC18596813 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Criollo_cocoa_genome_V2 (GCF_000208745.1) 6 NC_030855.1 (23631959..23635080)

Chromosome 6 - NC_030855.1Genomic Context describing neighboring genes Neighboring gene putative E3 ubiquitin-protein ligase RING1a Neighboring gene glyoxysomal processing protease, glyoxysomal Neighboring gene squamosa promoter-binding-like protein 3 Neighboring gene dof zinc finger protein DOF1.4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030855.1 Chromosome 6 Reference Criollo_cocoa_genome_V2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ornithine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Theobroma cacao Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Criollo_cocoa_genome_V2 Primary Assembly

Genomic

  1. NC_030855.1 Reference Criollo_cocoa_genome_V2 Primary Assembly

    Range
    23631959..23635080
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007025515.2 → XP_007025577.2  mitochondrial arginine transporter BAC1

    UniProtKB/TrEMBL
    A0A061GMA1
Nucleotide Protein
Heading Accession and Version

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