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LOC18437915 lactosylceramide 4-alpha-galactosyltransferase [ Amborella trichopoda ]

Gene ID: 18437915, updated on 24-Aug-2022

Summary

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Gene symbol
LOC18437915
Gene description
lactosylceramide 4-alpha-galactosyltransferase
Locus tag
AMTR_s00029p00235780
Gene type
protein coding
RefSeq status
MODEL
Organism
Amborella trichopoda
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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Genomic context

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See LOC18437915 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006499435.1 (5231271..5232605, complement)

NW_006499435.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat-containing protein At4g02750 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At3g47570 Neighboring gene 30S ribosomal protein S31, chloroplastic Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At3g47570 Neighboring gene receptor-like protein 12

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006499435.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
lactosylceramide 4-alpha-galactosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AMTR1.0 Primary Assembly

Genomic

  1. NW_006499435.1 Reference AMTR1.0 Primary Assembly

    Range
    5231271..5232605 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006848113.3 → XP_006848176.3  lactosylceramide 4-alpha-galactosyltransferase

    UniProtKB/TrEMBL
    W1PIG2
    Conserved Domains (2) summary
    pfam04488
    Location:142 → 267
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:286 → 403
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
Nucleotide Protein
Heading Accession and Version

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