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LOC18423869 mediator of RNA polymerase II transcription subunit 23 [ Amborella trichopoda ]

Gene ID: 18423869, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18423869
Gene description
mediator of RNA polymerase II transcription subunit 23
Locus tag
AMTR_s00060p00196600
Gene type
protein coding
RefSeq status
MODEL
Organism
Amborella trichopoda
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella
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Genomic context

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See LOC18423869 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current AMTR1.0 (GCF_000471905.2) Unplaced Scaffold NW_006495044.1 (3561095..3657707)

NW_006495044.1Genomic Context describing neighboring genes Neighboring gene protein FAR1-RELATED SEQUENCE 11-like Neighboring gene uncharacterized LOC110008445 Neighboring gene plant UBX domain-containing protein 2 Neighboring gene protein TIFY 6B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006495044.1 Unplaced Scaffold Reference AMTR1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amborella trichopoda Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AMTR1.0 Primary Assembly

Genomic

  1. NW_006495044.1 Reference AMTR1.0 Primary Assembly

    Range
    3561095..3657707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020676137.1 → XP_020531796.1  mediator of RNA polymerase II transcription subunit 23 isoform X1

    UniProtKB/TrEMBL
    W1NK96
    Conserved Domains (1) summary
    pfam11573
    Location:682 → 1305
    Med23; Mediator complex subunit 23

  2. XM_020676142.1 → XP_020531801.1  mediator of RNA polymerase II transcription subunit 23 isoform X2

    Conserved Domains (1) summary
    pfam11573
    Location:682 → 1248
    Med23; Mediator complex subunit 23
Nucleotide Protein
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