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C54G6.2 C-CAP/cofactor C-like domain-containing protein;TBCC domain-containing protein 1 [ Caenorhabditis elegans ]

Gene ID: 183814, updated on 18-Sep-2024

Summary

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Official Symbol
C54G6.2
Official Full Name
C-CAP/cofactor C-like domain-containing protein;TBCC domain-containing protein 1
Primary source
WormBase:WBGene00016931
Locus tag
CELE_C54G6.2
See related
AllianceGenome:WB:WBGene00016931
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to be involved in maintenance of Golgi location and maintenance of centrosome location. Predicted to be located in cytoplasm; microtubule organizing center; and spindle pole. Predicted to be active in spindle pole centrosome. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See C54G6.2 in Genome Data Viewer
Location:
chromosome: I
Exon count:
9
Sequence:
Chromosome: I; NC_003279.8 (1006177..1011450)

Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Homeobox-containing protein 1 Neighboring gene L-serine-phosphatidylethanolamine phosphatidyltransferase Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene MADF domain-containing protein Neighboring gene EB domain-containing protein Neighboring gene Saposin B-type domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003279.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Process Evidence Code Pubs
involved_in maintenance of Golgi location IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in maintenance of centrosome location IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
  
located_in spindle pole IEA
Inferred from Electronic Annotation
more info
  
is_active_in spindle pole centrosome IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
C-CAP/cofactor C-like domain-containing protein;TBCC domain-containing protein 1
NP_001343722.1
  • Confirmed by transcript evidence
NP_001343723.1
  • Confirmed by transcript evidence
NP_490805.5
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003279.8 Reference assembly

    Range
    1006177..1011450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_058404.6 → NP_490805.5  TBCC domain-containing protein 1 [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A2C9C2X0
    Conserved Domains (1) summary
    cl29757
    Location:265 → 354
    TBCC; Tubulin binding cofactor C

  2. NM_001356796.3 → NP_001343722.1  C-CAP/cofactor C-like domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A2C9C346
    Conserved Domains (1) summary
    cl29757
    Location:6 → 69
    TBCC; Tubulin binding cofactor C

  3. NM_001356797.1 → NP_001343723.1  C-CAP/cofactor C-like domain-containing protein [Caenorhabditis elegans]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A2C9C2U6
Nucleotide Protein
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