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CTHT_0011540 hypothetical protein [ Chaetomium thermophilum var. thermophilum DSM 1495 ]

Gene ID: 18255192, updated on 21-Dec-2023

Summary

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Gene symbol
CTHT_0011540
Gene description
hypothetical protein
Locus tag
CTHT_0011540
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Chaetomium thermophilum var. thermophilum DSM 1495 (strain: DSM 1495, variety: thermophilum, culture-collection: DSM:1495, type-material: type material of Chaetomium thermophilum)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetidae; Sordariales; Chaetomiaceae; Chaetomium
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Genomic context

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See CTHT_0011540 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_006383030.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene putative GDP-GTP exchange factor Neighboring gene putative pre-mRNA splicing factor Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006383030.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Insight into structure and assembly of the nuclear pore complex by utilizing the genome of a eukaryotic thermophile. Amlacher S, et al. Cell, 2011 Jul 22. PMID 21784248

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_006691673.1
  • SMART: MIR Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006383030.1 Reference assembly

    Range
    438682..442019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006691610.1 → XP_006691673.1  hypothetical protein CTHT_0011540 [Chaetomium thermophilum var. thermophilum DSM 1495]

    See identical proteins and their annotated locations for XP_006691673.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    G0S0X1
    Conserved Domains (4) summary
    smart00472
    Location:488 → 539
    MIR; Domain in ryanodine and inositol trisphosphate receptors and protein O-mannosyltransferases
    COG1928
    Location:51 → 762
    PMT1; Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]
    pfam02366
    Location:61 → 310
    PMT; Dolichyl-phosphate-mannose-protein mannosyltransferase
    pfam16192
    Location:558 → 756
    PMT_4TMC; C-terminal four TMM region of protein-O-mannosyltransferase
Nucleotide Protein
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