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COX2 cytochrome c oxidase subunit II [ Rhipicephalus microplus (southern cattle tick) ]

Gene ID: 18250936, updated on 18-Aug-2023

Summary

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Gene symbol
COX2
Gene description
cytochrome c oxidase subunit II
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Rhipicephalus microplus (isolate: BomiB)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Acari; Parasitiformes; Ixodida; Ixodoidea; Ixodidae; Rhipicephalinae; Rhipicephalus; Boophilus
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Genomic context

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See COX2 in Genome Data Viewer
Annotation release Status Assembly Chr Location
100 current ASM1333972v1 (GCF_013339725.1) MT (non-nuclear) NC_023335.1 (2690..3362)

Chromosome MT - NC_023335.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase subunit 2 Neighboring gene cytochrome c oxidase subunit I Neighboring gene ATP synthase F0 subunit 8 Neighboring gene ATP synthase F0 subunit 6 Neighboring gene cytochrome c oxidase subunit III

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_023335.1 Chromosome MT Reference ASM1333972v1 non-nuclear

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular phylogeny of soft ticks (Ixodida: Argasidae) inferred from mitochondrial genome and nuclear rRNA sequences. Burger TD, et al. Ticks Tick Borne Dis, 2014 Mar. PMID 24378079

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
cytochrome c oxidase subunit II
YP_008999528.1
  • TAA stop codon is completed by the addition of 3' A residues to the mRNA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_023335.1 Reference assembly

    Range
    2690..3362
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_008999528.1 cytochrome c oxidase subunit II (mitochondrion) [Rhipicephalus microplus]

    See identical proteins and their annotated locations for YP_008999528.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    V9MMA5, V9MMC9
    Conserved Domains (3) summary
    MTH00154
    Location:1 → 224
    COX2; cytochrome c oxidase subunit II; Provisional
    cd13912
    Location:94 → 221
    CcO_II_C; C-terminal domain of Cytochrome c Oxidase subunit II
    pfam02790
    Location:3 → 83
    COX2_TM; Cytochrome C oxidase subunit II, transmembrane domain
Nucleotide Protein
Heading Accession and Version

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