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C08E8.2 Strictosidine synthase conserved region domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 182407, updated on 2-Nov-2024

Summary

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Official Symbol
C08E8.2
Official Full Name
Strictosidine synthase conserved region domain-containing protein
Primary source
WormBase:WBGene00007438
Locus tag
CELE_C08E8.2
See related
AllianceGenome:WB:WBGene00007438
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
Summary
Predicted to enable hydrolase activity. Predicted to be involved in biosynthetic process. Orthologous to human APMAP (adipocyte plasma membrane associated protein). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See C08E8.2 in Genome Data Viewer
Location:
chromosome: V
Exon count:
3
Sequence:
Chromosome: V; NC_003283.11 (18353510..18355842, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Uncharacterized protein Neighboring gene Salivary lipocalin Neighboring gene pseudo Neighboring gene Elongation factor 1-alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. EPIC: software toolkit for elution profile-based inference of protein complexes. Hu LZ, et al. Nat Methods, 2019 Aug. PMID 31308550, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by WormBase

Function Evidence Code Pubs
enables hydrolase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables strictosidine synthase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Strictosidine synthase conserved region domain-containing protein
NP_507590.2
  • Predicted

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    18353510..18355842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_075189.2 → NP_507590.2  Strictosidine synthase conserved region domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_507590.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    O62040
    Conserved Domains (1) summary
    cl22863
    Location:126 → 207
    Str_synth; Strictosidine synthase
Nucleotide Protein
Heading Accession and Version

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