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Musk muscle, skeletal, receptor tyrosine kinase [ Mus musculus (house mouse) ]

Gene ID: 18198, updated on 14-Nov-2024

Summary

Official Symbol
Muskprovided by MGI
Official Full Name
muscle, skeletal, receptor tyrosine kinaseprovided by MGI
Primary source
MGI:MGI:103581
See related
Ensembl:ENSMUSG00000057280 AllianceGenome:MGI:103581
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Mlk; Mdk4; Nsk1; Nsk2; Nsk3
Summary
This gene encodes a member of the protein tyrosine kinase family. The encoded protein is a type 1 receptor-like protein located in muscle membrane that is activated by the heparan sulfate proteoglycan agrin released by nerve cells. The encoded protein activates signaling cascades responsible for multiple aspects of motor neuron and muscle development, including organization of the postsynaptic membrane, synaptic gene transcription, patterning of skeletal muscle, anchoring of acetylcholinesterase, and guidance of motor axons. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq, Jul 2008]
Expression
Broad expression in limb E14.5 (RPKM 1.2), colon adult (RPKM 0.4) and 16 other tissues See more
Orthologs
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Genomic context

See Musk in Genome Data Viewer
Location:
4 B3; 4 31.87 cM
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (58285742..58377848)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (58285729..58377848)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 35402 Neighboring gene sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 Neighboring gene STARR-seq mESC enhancer starr_10355 Neighboring gene predicted gene, 30907 Neighboring gene STARR-seq mESC enhancer starr_10356 Neighboring gene STARR-seq mESC enhancer starr_10357 Neighboring gene STARR-seq mESC enhancer starr_10358 Neighboring gene microRNA 3095 Neighboring gene lysophosphatidic acid receptor 1 Neighboring gene arginine/serine-rich coiled-coil 2 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Clone Names

  • MGC117677

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables GPI-linked ephrin receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables PDZ domain binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables Wnt-protein binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables boss receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables brain-derived neurotrophic factor receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables epidermal growth factor receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables fibroblast growth factor receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables hepatocyte growth factor receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables histone H2AXY142 kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables histone H3Y41 kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables insulin receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables insulin-like growth factor receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables macrophage colony-stimulating factor receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables placental growth factor receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables platelet-derived growth factor alpha-receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables platelet-derived growth factor beta-receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
enables protein tyrosine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein tyrosine kinase activity IGI
Inferred from Genetic Interaction
more info
PubMed 
enables protein tyrosine kinase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables protein tyrosine kinase activity ISO
Inferred from Sequence Orthology
more info
 
enables protein tyrosine kinase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables protein tyrosine kinase collagen receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables stem cell factor receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables transmembrane receptor protein tyrosine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables transmembrane receptor protein tyrosine kinase activity TAS
Traceable Author Statement
more info
PubMed 
enables transmembrane-ephrin receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables vascular endothelial growth factor receptor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in Kit signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in brain-derived neurotrophic factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in cell surface receptor protein tyrosine kinase signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 
involved_in collagen-activated tyrosine kinase receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in enzyme-linked receptor protein signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in enzyme-linked receptor protein signaling pathway IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in enzyme-linked receptor protein signaling pathway IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in epidermal growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in fibroblast growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in hepatocyte growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in insulin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in insulin-like growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in long-term synaptic potentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in macrophage colony-stimulating factor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in memory ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of motor neuron apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in multicellular organism development IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in negative regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within neuromuscular junction development IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in neuromuscular junction development ISO
Inferred from Sequence Orthology
more info
 
involved_in neuromuscular junction development ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in platelet-derived growth factor receptor-alpha signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in platelet-derived growth factor receptor-beta signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of Rac protein signal transduction IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of Rac protein signal transduction IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of Rac protein signal transduction IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of motor neuron apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of peptidyl-tyrosine phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein geranylgeranylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of protein phosphorylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of protein phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of protein phosphorylation ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in positive regulation of skeletal muscle acetylcholine-gated channel clustering IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of skeletal muscle acetylcholine-gated channel clustering IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in positive regulation of skeletal muscle acetylcholine-gated channel clustering IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of synaptic assembly at neuromuscular junction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of synaptic transmission, cholinergic ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within receptor clustering IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within receptor clustering IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in receptor clustering ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of DNA-templated transcription IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of synaptic assembly at neuromuscular junction IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to electrical stimulus ISO
Inferred from Sequence Orthology
more info
 
involved_in skeletal muscle acetylcholine-gated channel clustering IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in vascular endothelial growth factor receptor-1 signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in vascular endothelial growth factor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cell projection ISO
Inferred from Sequence Orthology
more info
 
located_in external side of plasma membrane ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in neuromuscular junction IDA
Inferred from Direct Assay
more info
PubMed 
located_in neuromuscular junction IDA
Inferred from Direct Assay
more info
PubMed 
located_in neuromuscular junction ISO
Inferred from Sequence Orthology
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane TAS
Traceable Author Statement
more info
PubMed 
is_active_in postsynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in postsynaptic membrane IDA
Inferred from Direct Assay
more info
PubMed 
part_of receptor complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of receptor complex ISO
Inferred from Sequence Orthology
more info
PubMed 
located_in synapse IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
muscle, skeletal receptor tyrosine-protein kinase
Names
muscle localized kinase 2
muscle-specific kinase receptor
muscle-specific tyrosine-protein kinase receptor
NP_001032204.2
NP_001032205.1
NP_001032206.1
NP_001032207.1
NP_001159468.1
NP_035074.2
XP_006537722.1
XP_006537724.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001037127.2NP_001032204.2  muscle, skeletal receptor tyrosine-protein kinase isoform 1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
    Source sequence(s)
    AL805969, AL807748
    Consensus CDS
    CCDS51182.1
    UniProtKB/TrEMBL
    Q32SD4
    Conserved Domains (6) summary
    cd05050
    Location:593882
    PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
    cd00096
    Location:239306
    Ig; Immunoglobulin domain
    cd07469
    Location:338482
    CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
    pfam07679
    Location:121208
    I-set; Immunoglobulin I-set domain
    pfam07714
    Location:599880
    Pkinase_Tyr; Protein tyrosine kinase
    cl11960
    Location:135201
    Ig; Immunoglobulin domain
  2. NM_001037128.1NP_001032205.1  muscle, skeletal receptor tyrosine-protein kinase isoform 2

    See identical proteins and their annotated locations for NP_001032205.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant lacks an alternate, in-frame segment in the coding region, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
    Source sequence(s)
    AY955297, BC100342, U37709
    UniProtKB/TrEMBL
    Q32SD3, Q32SD4
    Conserved Domains (6) summary
    cd05050
    Location:578867
    PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
    cd00096
    Location:239306
    Ig; Immunoglobulin domain
    cd07469
    Location:323467
    CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
    pfam07679
    Location:121208
    I-set; Immunoglobulin I-set domain
    pfam07714
    Location:584865
    Pkinase_Tyr; Protein tyrosine kinase
    cl11960
    Location:135201
    Ig; Immunoglobulin domain
  3. NM_001037129.1NP_001032206.1  muscle, skeletal receptor tyrosine-protein kinase isoform 3

    See identical proteins and their annotated locations for NP_001032206.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) lacks two alternate, in-frame segments in the coding region, compared to variant 1. The encoded isoform (3) is shorter than isoform 1.
    Source sequence(s)
    BC100342, U37709
    Consensus CDS
    CCDS38770.1
    UniProtKB/TrEMBL
    I7GSQ5, Q497X0
    Related
    ENSMUSP00000136696.2, ENSMUST00000177951.8
    Conserved Domains (6) summary
    cd05050
    Location:570859
    PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
    cd00096
    Location:239306
    Ig; Immunoglobulin domain
    cd07469
    Location:323466
    CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
    pfam07679
    Location:121208
    I-set; Immunoglobulin I-set domain
    pfam07714
    Location:576857
    Pkinase_Tyr; Protein tyrosine kinase
    cl11960
    Location:135201
    Ig; Immunoglobulin domain
  4. NM_001037130.1NP_001032207.1  muscle, skeletal receptor tyrosine-protein kinase isoform 5

    See identical proteins and their annotated locations for NP_001032207.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (5) lacks three alternate, in-frame segments in the coding region, compared to variant 1. The encoded isoform (5) is shorter than isoform 1.
    Source sequence(s)
    BC100342, U37708
    Consensus CDS
    CCDS18210.1
    UniProtKB/TrEMBL
    I7GSQ5, Q32S49
    Related
    ENSMUSP00000099957.4, ENSMUST00000102893.10
    Conserved Domains (6) summary
    cd05050
    Location:560849
    PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
    cd00096
    Location:229296
    Ig; Immunoglobulin domain
    cd07469
    Location:313456
    CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
    pfam07679
    Location:121208
    I-set; Immunoglobulin I-set domain
    pfam07714
    Location:566847
    Pkinase_Tyr; Protein tyrosine kinase
    cl11960
    Location:135201
    Ig; Immunoglobulin domain
  5. NM_001165996.1NP_001159468.1  muscle, skeletal receptor tyrosine-protein kinase isoform 6

    See identical proteins and their annotated locations for NP_001159468.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) lacks an alternate in-frame exon and uses an alternate in-frame splice site in the central coding region, and differs in the presence and absence of exons in the 3' coding region and 3' UTR, compared to variant 1. The resulting isoform (6) has a distinct C-terminus and is shorter than isoform 1.
    Source sequence(s)
    AL805969, AL807748
    UniProtKB/TrEMBL
    Q1XD56
    Conserved Domains (4) summary
    cd00096
    Location:229296
    Ig; Immunoglobulin domain
    cd07469
    Location:313457
    CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
    pfam07679
    Location:121208
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:135201
    Ig; Immunoglobulin domain
  6. NM_010944.2NP_035074.2  muscle, skeletal receptor tyrosine-protein kinase isoform 4

    See identical proteins and their annotated locations for NP_035074.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (4) lacks two alternate, in-frame segments in the coding region, compared to variant 1. The encoded isoform (4) is shorter than isoform 1.
    Source sequence(s)
    BC100342, U37709
    Consensus CDS
    CCDS18211.1
    UniProtKB/Swiss-Prot
    Q61005, Q61006, Q61987, Q61988
    UniProtKB/TrEMBL
    I7GSQ5, Q32S50
    Related
    ENSMUSP00000081625.6, ENSMUST00000084578.12
    Conserved Domains (6) summary
    cd05050
    Location:568857
    PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
    cd00096
    Location:229296
    Ig; Immunoglobulin domain
    cd07469
    Location:313457
    CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
    pfam07679
    Location:121208
    I-set; Immunoglobulin I-set domain
    pfam07714
    Location:574855
    Pkinase_Tyr; Protein tyrosine kinase
    cl11960
    Location:135201
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    58285742..58377848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006537659.4XP_006537722.1  muscle, skeletal receptor tyrosine-protein kinase isoform X1

    See identical proteins and their annotated locations for XP_006537722.1

    UniProtKB/TrEMBL
    Q32SD4
    Conserved Domains (4) summary
    cd05050
    Location:588877
    PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
    cd07469
    Location:333477
    CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
    pfam07679
    Location:121208
    I-set; Immunoglobulin I-set domain
    pfam13927
    Location:246306
    Ig_3; Immunoglobulin domain
  2. XM_006537661.4XP_006537724.1  muscle, skeletal receptor tyrosine-protein kinase isoform X2

    UniProtKB/TrEMBL
    I7GSQ5
    Conserved Domains (4) summary
    cd05050
    Location:580869
    PTKc_Musk; Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase
    cd07469
    Location:333476
    CRD_TK_ROR_related; Cysteine-rich domain of proteins similar to tyrosine kinase-like orphan receptors
    pfam07679
    Location:121208
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:233316
    Ig; Immunoglobulin domain