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LOC18104831 F-box protein GID2 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18104831, updated on 23-Nov-2023

Summary

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Gene symbol
LOC18104831
Gene description
F-box protein GID2
Locus tag
POPTR_014G022100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC18104831 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
1
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 14 NC_037298.2 (1328607..1329455)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 14 NC_037298.1 (1944695..1945558)

Chromosome 14 - NC_037298.2Genomic Context describing neighboring genes Neighboring gene cytochrome P450 81Q32 Neighboring gene MFP1 attachment factor 1 Neighboring gene protein MRG2 Neighboring gene transcription factor MYB44

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037298.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    1328607..1329455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006374806.3 → XP_006374868.1  F-box protein GID2

    See identical proteins and their annotated locations for XP_006374868.1

    UniProtKB/TrEMBL
    B9MVW7
    Conserved Domains (1) summary
    pfam00646
    Location:44 → 89
    F-box; F-box domain
Nucleotide Protein
Heading Accession and Version

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