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LOC18104624 mannan endo-1,4-beta-mannosidase 2 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18104624, updated on 19-Jun-2024

Summary

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Gene symbol
LOC18104624
Gene description
mannan endo-1,4-beta-mannosidase 2
Locus tag
POPTR_013G130400v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC18104624 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
5
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 13 NC_037297.2 (13691450..13696457)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 13 NC_037297.1 (14201362..14206564)

Chromosome 13 - NC_037297.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18104621 Neighboring gene uncharacterized LOC18104623 Neighboring gene uncharacterized LOC18104625 Neighboring gene pentatricopeptide repeat-containing protein At5g16640, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. Ralph SG, et al. BMC Genomics, 2008 Jan 29. PMID 18230180, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannan endo-1,4-beta-mannosidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037297.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    13691450..13696457
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006376420.3 → XP_006376482.2  mannan endo-1,4-beta-mannosidase 2

    UniProtKB/TrEMBL
    B9N5V8
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Research Materials