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LOC18102104 scopoletin glucosyltransferase-like [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18102104, updated on 23-Nov-2023

Summary

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Gene symbol
LOC18102104
Gene description
scopoletin glucosyltransferase-like
Locus tag
POPTR_009G098966v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC18102104 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
1
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 9 NC_037293.2 (8824062..8825851, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 9 NC_037293.1 (8819308..8821128, complement)

Chromosome 9 - NC_037293.2Genomic Context describing neighboring genes Neighboring gene uncharacterized protein At4g06744 Neighboring gene protein IRX15-LIKE Neighboring gene scopoletin glucosyltransferase-like Neighboring gene CBS domain-containing protein CBSX2, chloroplastic

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scopoletin glucosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037293.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    8824062..8825851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006379133.3 → XP_006379195.1  scopoletin glucosyltransferase-like

    See identical proteins and their annotated locations for XP_006379195.1

    UniProtKB/TrEMBL
    A0A3N7FJF7
    Conserved Domains (2) summary
    COG1819
    Location:9 → 463
    YjiC; UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism]
    cl10013
    Location:7 → 485
    Glycosyltransferase_GTB_type; Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate ...
Nucleotide Protein
Heading Accession and Version

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