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LOC18100287 putative pectinesterase 63 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18100287, updated on 23-Nov-2023

Summary

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Gene symbol
LOC18100287
Gene description
putative pectinesterase 63
Locus tag
POPTR_006G137100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC18100287 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 6 NC_037290.2 (11338730..11341088, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 6 NC_037290.1 (11362432..11364785, complement)

Chromosome 6 - NC_037290.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18100285 Neighboring gene auxin-responsive protein SAUR76 Neighboring gene protein SMALL AUXIN UP-REGULATED RNA 10 Neighboring gene respiratory burst oxidase homolog protein E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative pectinesterase 63

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037290.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    11338730..11341088 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006381505.3 → XP_006381567.2  putative pectinesterase 63

Nucleotide Protein
Heading Accession and Version

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