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LOC18095863 probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 18095863, updated on 23-Nov-2023

Summary

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Gene symbol
LOC18095863
Gene description
probable NAD(P)H dehydrogenase (quinone) FQR1-like 1
Locus tag
POPTR_001G410700v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC18095863 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 1 NC_037285.2 (44173296..44176597)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 1 NC_037285.1 (43489233..43492511, complement)

Chromosome 1 - NC_037285.2Genomic Context describing neighboring genes Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 Neighboring gene uncharacterized LOC127905029 Neighboring gene G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 Neighboring gene transcription factor bHLH123 Neighboring gene uncharacterized LOC18095865

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of 4,664 high-quality sequence-finished poplar full-length cDNA clones and their utility for the discovery of genes responding to insect feeding. Ralph SG, et al. BMC Genomics, 2008 Jan 29. PMID 18230180, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD(P)H dehydrogenase (quinone) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable NAD(P)H dehydrogenase (quinone) FQR1-like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037285.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    44173296..44176597
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006370515.3 → XP_006370577.1  probable NAD(P)H dehydrogenase (quinone) FQR1-like 1

    See identical proteins and their annotated locations for XP_006370577.1

    UniProtKB/TrEMBL
    A9PDW4, U5GWE6
    Conserved Domains (1) summary
    cl00438
    Location:3 → 201
    FMN_red; NADPH-dependent FMN reductase
Nucleotide Protein
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