U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

AGABI2DRAFT_198050 hypothetical protein [ Agaricus bisporus var. bisporus H97 ]

Gene ID: 18083639, updated on 18-Oct-2023

Summary

Go to the top of the page Help
Gene symbol
AGABI2DRAFT_198050
Gene description
hypothetical protein
Locus tag
AGABI2DRAFT_198050
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Agaricus bisporus var. bisporus H97 (strain: H97, variety: bisporus)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricaceae; Agaricus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Unknown
Exon count:
13

NW_006267344.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006267344.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. Morin E, et al. Proc Natl Acad Sci U S A, 2012 Oct 23. PMID 23045686, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Names
hypothetical protein
XP_006454654.1
  • similar to hypothetical protein CC1G_01742 [Coprinopsis cinerea okayama7#130]

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006267344.1 Reference assembly

    Range
    2365231..2372941
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006454591.1 → XP_006454654.1  hypothetical protein AGABI2DRAFT_198050 [Agaricus bisporus var. bisporus H97]

    See identical proteins and their annotated locations for XP_006454654.1

    Status: PROVISIONAL

    Conserved Domains (4) summary
    smart00554
    Location:236 → 337
    FAS1; Four repeated domains in the Fasciclin I family of proteins, present in many other contexts
    pfam00153
    Location:977 → 1069
    Mito_carr; Mitochondrial carrier protein
    pfam02469
    Location:352 → 484
    Fasciclin; Fasciclin domain
    cl02663
    Location:497 → 630
    Fasciclin; Fasciclin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases