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AGABI2DRAFT_150780 hypothetical protein [ Agaricus bisporus var. bisporus H97 ]

Gene ID: 18079303, updated on 18-Oct-2023

Summary

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Gene symbol
AGABI2DRAFT_150780
Gene description
hypothetical protein
Locus tag
AGABI2DRAFT_150780
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Agaricus bisporus var. bisporus H97 (strain: H97, variety: bisporus)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricaceae; Agaricus
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Genomic context

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Location:
chromosome: Unknown
Exon count:
15

NW_006267368.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006267368.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. Morin E, et al. Proc Natl Acad Sci U S A, 2012 Oct 23. PMID 23045686, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetolactate synthase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in branched-chain amino acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_006460952.1
  • similar to hypothetical protein CC1G_07393 [Coprinopsis cinerea okayama7#130]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006267368.1 Reference assembly

    Range
    819626..823748
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006460889.1 → XP_006460952.1  hypothetical protein AGABI2DRAFT_150780 [Agaricus bisporus var. bisporus H97]

    See identical proteins and their annotated locations for XP_006460952.1

    Status: PROVISIONAL

    Conserved Domains (3) summary
    cd04878
    Location:778 → 848
    ACT_AHAS; N-terminal ACT domain of the Escherichia coli IlvH-like regulatory subunit of acetohydroxyacid synthase (AHAS)
    TIGR00119
    Location:777 → 1001
    acolac_sm; acetolactate synthase, small subunit
    pfam10369
    Location:947 → 999
    ALS_ss_C; Small subunit of acetolactate synthase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases