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LOC18054473 probable sucrose-phosphate synthase 1 [ Citrus x clementina ]

Gene ID: 18054473, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18054473
Gene description
probable sucrose-phosphate synthase 1
Locus tag
CICLE_v10007312mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18054473 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006263303.1 (1634298..1639603)

NW_006263303.1Genomic Context describing neighboring genes Neighboring gene bifunctional purple acid phosphatase 26 Neighboring gene synaptotagmin-4 Neighboring gene probable glycosyltransferase At5g11130 Neighboring gene probable glycosyltransferase At5g25310

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006263303 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sucrose synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sucrose-phosphate synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in sucrose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable sucrose-phosphate synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006263303.1 Reference Citrus_clementina_v1.0

    Range
    1634298..1639603
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006450320.2 → XP_006450383.1  probable sucrose-phosphate synthase 1

    See identical proteins and their annotated locations for XP_006450383.1

    UniProtKB/TrEMBL
    V4TSV4
    Conserved Domains (3) summary
    cd03800
    Location:167 → 662
    GT1_Sucrose_synthase; This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose ...
    TIGR02468
    Location:1 → 1049
    sucrsPsyn_pln; sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant
    pfam13025
    Location:85 → 126
    DUF3886; Protein of unknown function (DUF3886)
Nucleotide Protein
Heading Accession and Version

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