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LOC18048071 probable pectinesterase/pectinesterase inhibitor 20 [ Citrus x clementina ]

Gene ID: 18048071, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18048071
Gene description
probable pectinesterase/pectinesterase inhibitor 20
Locus tag
CICLE_v10023535mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18048071 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262339.1 (37843548..37845886)

NW_006262339.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC18048069 Neighboring gene uncharacterized LOC112099951 Neighboring gene protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic Neighboring gene uncharacterized LOC18048074 Neighboring gene probable peroxidase 61

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262339 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable pectinesterase/pectinesterase inhibitor 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262339.1 Reference Citrus_clementina_v1.0

    Range
    37843548..37845886
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006442883.1 → XP_006442946.1  probable pectinesterase/pectinesterase inhibitor 20

    See identical proteins and their annotated locations for XP_006442946.1

    UniProtKB/TrEMBL
    V4U238
    Conserved Domains (3) summary
    PLN02713
    Location:1 → 572
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    cd15798
    Location:40 → 196
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
    pfam01095
    Location:259 → 557
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases