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LOC18043267 beta-glucosidase 17 [ Citrus x clementina ]

Gene ID: 18043267, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18043267
Gene description
beta-glucosidase 17
Locus tag
CICLE_v10031179mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18043267 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262274.1 (25340396..25344278)

NW_006262274.1Genomic Context describing neighboring genes Neighboring gene beta-glucosidase 17 Neighboring gene beta-glucosidase 17 Neighboring gene O-fucosyltransferase 20 Neighboring gene uroporphyrinogen-III C-methyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262274 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-glucosidase 17

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262274.1 Reference Citrus_clementina_v1.0

    Range
    25340396..25344278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006438993.2 → XP_006439056.1  beta-glucosidase 17 isoform X1

    See identical proteins and their annotated locations for XP_006439056.1

    UniProtKB/TrEMBL
    V4TG30, V4TQY5
    Conserved Domains (1) summary
    cl23725
    Location:48 → 522
    Glyco_hydro_1; Glycosyl hydrolase family 1

  2. XM_006438992.2 → XP_006439055.1  beta-glucosidase 17 isoform X2

    See identical proteins and their annotated locations for XP_006439055.1

    UniProtKB/TrEMBL
    V4TG30, V4TKY6
    Conserved Domains (1) summary
    cl23725
    Location:48 → 521
    Glyco_hydro_1; Glycosyl hydrolase family 1

  3. XM_006438994.2 → XP_006439057.1  beta-glucosidase 17 isoform X3

    See identical proteins and their annotated locations for XP_006439057.1

    UniProtKB/TrEMBL
    V4TG30, V4TG35
    Conserved Domains (1) summary
    cl23725
    Location:48 → 471
    Glyco_hydro_1; Glycosyl hydrolase family 1
Nucleotide Protein
Heading Accession and Version

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