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LOC18041628 putative pectinesterase/pectinesterase inhibitor 22 [ Citrus x clementina ]

Gene ID: 18041628, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18041628
Gene description
putative pectinesterase/pectinesterase inhibitor 22
Locus tag
CICLE_v10000816mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18041628 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262201.1 (33695644..33697730, complement)

NW_006262201.1Genomic Context describing neighboring genes Neighboring gene protein NAR1-like Neighboring gene pectinesterase Neighboring gene F-box/LRR-repeat protein 3 Neighboring gene uncharacterized LOC18041738

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262201 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative pectinesterase/pectinesterase inhibitor 22

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262201.1 Reference Citrus_clementina_v1.0

    Range
    33695644..33697730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006433404.2 → XP_006433467.1  putative pectinesterase/pectinesterase inhibitor 22

    See identical proteins and their annotated locations for XP_006433467.1

    UniProtKB/TrEMBL
    V4T0U0
    Conserved Domains (3) summary
    PLN02506
    Location:1 → 535
    PLN02506; putative pectinesterase/pectinesterase inhibitor
    cd15798
    Location:38 → 192
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
    pfam01095
    Location:232 → 519
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

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