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LOC18039197 L-ascorbate peroxidase 2, cytosolic [ Citrus x clementina ]

Gene ID: 18039197, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18039197
Gene description
L-ascorbate peroxidase 2, cytosolic
Locus tag
CICLE_v10012554mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Citrus x clementina
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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Genomic context

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See LOC18039197 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Citrus_clementina_v1.0 (GCF_000493195.1) Unplaced Scaffold NW_006262139.1 (11704382..11706785, complement)

NW_006262139.1Genomic Context describing neighboring genes Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g67720 Neighboring gene caffeoyl-CoA O-methyltransferase Neighboring gene uncharacterized LOC18039164 Neighboring gene floral homeotic protein APETALA 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006262139 Unplaced Scaffold Reference Citrus_clementina_v1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellular response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hydrogen peroxide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to reactive oxygen species IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
L-ascorbate peroxidase 2, cytosolic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Citrus clementina Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Citrus_clementina_v1.0

Genomic

  1. NW_006262139.1 Reference Citrus_clementina_v1.0

    Range
    11704382..11706785 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006428824.2 → XP_006428887.1  L-ascorbate peroxidase 2, cytosolic

    See identical proteins and their annotated locations for XP_006428887.1

    UniProtKB/TrEMBL
    V4SNA9
    Conserved Domains (1) summary
    cl00196
    Location:1 → 250
    plant_peroxidase_like; Heme-dependent peroxidases similar to plant peroxidases
Nucleotide Protein
Heading Accession and Version

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