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LOC18025686 S-alkyl-thiohydroximate lyase SUR1 [ Eutrema salsugineum ]

Gene ID: 18025686, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18025686
Gene description
S-alkyl-thiohydroximate lyase SUR1
Locus tag
EUTSA_v10001981mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18025686 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256895.1 (10752948..10755486, complement)

NW_006256895.1Genomic Context describing neighboring genes Neighboring gene tyrosine aminotransferase Neighboring gene uncharacterized LOC18025685 Neighboring gene probable protein phosphatase 2C 58 Neighboring gene mitotic checkpoint serine/threonine-protein kinase BUB1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256895 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transaminase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
S-alkyl-thiohydroximate lyase SUR1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256895.1 Reference Eutsalg1_0

    Range
    10752948..10755486 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006408931.2 → XP_006408994.1  S-alkyl-thiohydroximate lyase SUR1

    See identical proteins and their annotated locations for XP_006408994.1

    UniProtKB/TrEMBL
    V4M619, V4NUK0
    Conserved Domains (2) summary
    cd00609
    Location:72 → 436
    AAT_like; Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine ...
    PLN02187
    Location:1 → 463
    PLN02187; rooty/superroot1
Nucleotide Protein
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