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LOC18020896 probable pectinesterase/pectinesterase inhibitor 33 [ Eutrema salsugineum ]

Gene ID: 18020896, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18020896
Gene description
probable pectinesterase/pectinesterase inhibitor 33
Locus tag
EUTSA_v10010228mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18020896 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256858.1 (4536299..4538467, complement)

NW_006256858.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH domain-containing protein 25 Neighboring gene uncharacterized LOC18020895 Neighboring gene riboflavin biosynthesis protein PYRR, chloroplastic Neighboring gene pectinesterase inhibitor 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256858 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable pectinesterase/pectinesterase inhibitor 33

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256858.1 Reference Eutsalg1_0

    Range
    4536299..4538467 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006404325.2 → XP_006404388.1  probable pectinesterase/pectinesterase inhibitor 33

    See identical proteins and their annotated locations for XP_006404388.1

    UniProtKB/TrEMBL
    V4NHZ9
    Conserved Domains (3) summary
    PLN02995
    Location:81 → 592
    PLN02995; Probable pectinesterase/pectinesterase inhibitor
    cd15798
    Location:86 → 242
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
    cl01911
    Location:278 → 577
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases