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LOC18019466 sulfoquinovosyl transferase SQD2 [ Eutrema salsugineum ]

Gene ID: 18019466, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18019466
Gene description
sulfoquinovosyl transferase SQD2
Locus tag
EUTSA_v10013276mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18019466 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256829.1 (302573..305923)

NW_006256829.1Genomic Context describing neighboring genes Neighboring gene putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Neighboring gene uncharacterized LOC18019465 Neighboring gene uncharacterized acetyltransferase At3g50280 Neighboring gene transcription factor DIVARICATA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256829 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256829.1 Reference Eutsalg1_0

    Range
    302573..305923
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006398580.2 → XP_006398643.1  sulfoquinovosyl transferase SQD2

    See identical proteins and their annotated locations for XP_006398643.1

    UniProtKB/TrEMBL
    V4N430
    Conserved Domains (2) summary
    cd03814
    Location:111 → 474
    GT1_like_2; This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can ...
    PLN02871
    Location:53 → 516
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
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Molecular Biology Databases