U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC18017773 pectinesterase PPME1 [ Eutrema salsugineum ]

Gene ID: 18017773, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC18017773
Gene description
pectinesterase PPME1
Locus tag
EUTSA_v10013901mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC18017773 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256829.1 (2353786..2355450)

NW_006256829.1Genomic Context describing neighboring genes Neighboring gene respiratory burst oxidase homolog protein A Neighboring gene uncharacterized LOC18017772 Neighboring gene probable pectinesterase 50 Neighboring gene glutamate dehydrogenase 2

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006256829 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pectinesterase PPME1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256829.1 Reference Eutsalg1_0

    Range
    2353786..2355450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006399162.2 → XP_006399225.1  pectinesterase PPME1

    See identical proteins and their annotated locations for XP_006399225.1

    UniProtKB/TrEMBL
    V4LLJ1
    Conserved Domains (2) summary
    PLN02665
    Location:20 → 364
    PLN02665; pectinesterase family protein
    cl01911
    Location:68 → 360
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases