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LOC18015115 probable pectinesterase/pectinesterase inhibitor 41 [ Eutrema salsugineum ]

Gene ID: 18015115, updated on 21-Dec-2023

Summary

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Gene symbol
LOC18015115
Gene description
probable pectinesterase/pectinesterase inhibitor 41
Locus tag
EUTSA_v10028546mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Eutrema salsugineum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema
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Genomic context

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See LOC18015115 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Eutsalg1_0 (GCF_000478725.1) Unplaced Scaffold NW_006256756.1 (1109082..1111632)

NW_006256756.1Genomic Context describing neighboring genes Neighboring gene probable pectinesterase/pectinesterase inhibitor 39 Neighboring gene probable pectinesterase/pectinesterase inhibitor 40 Neighboring gene epoxide hydrolase A Neighboring gene exocyst complex component SEC15B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006256756 Unplaced Scaffold Reference Eutsalg1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pectinesterase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable pectinesterase/pectinesterase inhibitor 41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Eutrema salsugineum Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eutsalg1_0

Genomic

  1. NW_006256756.1 Reference Eutsalg1_0

    Range
    1109082..1111632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006396377.2 → XP_006396440.1  probable pectinesterase/pectinesterase inhibitor 41

    See identical proteins and their annotated locations for XP_006396440.1

    UniProtKB/TrEMBL
    V4LDL9
    Conserved Domains (3) summary
    PLN02713
    Location:2 → 566
    PLN02713; Probable pectinesterase/pectinesterase inhibitor
    cd15798
    Location:34 → 190
    PMEI-like_3; Uncharacterized subfamily of plant invertase/pectin methylesterase inhibitor domains
    pfam01095
    Location:252 → 550
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases