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T05H4.15 F-box associated domain-containing protein;FBA_2 domain-containing protein [ Caenorhabditis elegans ]

Gene ID: 179030, updated on 18-Sep-2024

Summary

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Official Symbol
T05H4.15
Official Full Name
F-box associated domain-containing protein;FBA_2 domain-containing protein
Primary source
WormBase:WBGene00020276
Locus tag
CELE_T05H4.15
See related
AllianceGenome:WB:WBGene00020276
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Caenorhabditis elegans (strain: Bristol N2)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
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Genomic context

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See T05H4.15 in Genome Data Viewer
Location:
chromosome: V
Exon count:
5
Sequence:
Chromosome: V; NC_003283.11 (6440174..6441713, complement)

Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene NADH-cytochrome b5 reductase Neighboring gene NADH-cytochrome b5 reductase Neighboring gene U2A'/phosphoprotein 32 family A C-terminal domain-containing protein Neighboring gene F-box domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003283.11

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Large-scale RNAi screens identify novel genes that interact with the C. elegans retinoblastoma pathway as well as splicing-related components with synMuv B activity. Ceron J, et al. BMC Dev Biol, 2007 Apr 6. PMID 17417969, Free PMC Article
  2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

General protein information

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Preferred Names
F-box associated domain-containing protein;FBA_2 domain-containing protein
NP_001024106.1
  • Confirmed by transcript evidence
NP_504640.1
  • Confirmed by transcript evidence
NP_872174.1
  • Partially confirmed by transcript evidence

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003283.11 Reference assembly

    Range
    6440174..6441713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_072239.8 → NP_504640.1  F-box associated domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_504640.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L087
    Conserved Domains (1) summary
    pfam07735
    Location:266 → 311
    FBA_2; F-box associated

  2. NM_001028935.6 → NP_001024106.1  F-box associated domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_001024106.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q2Z1P0
    Conserved Domains (1) summary
    pfam07735
    Location:266 → 311
    FBA_2; F-box associated

  3. NM_182374.6 → NP_872174.1  FBA_2 domain-containing protein [Caenorhabditis elegans]

    See identical proteins and their annotated locations for NP_872174.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    H2L088
Nucleotide Protein
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