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LOC17894209 beta-arabinofuranosyltransferase RAY1 [ Capsella rubella ]

Gene ID: 17894209, updated on 21-Dec-2023

Summary

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Gene symbol
LOC17894209
Gene description
beta-arabinofuranosyltransferase RAY1
Locus tag
CARUB_v10019952mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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See LOC17894209 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238922.1 (10062869..10065617)

NW_006238922.1Genomic Context describing neighboring genes Neighboring gene ABC transporter B family member 26, chloroplastic Neighboring gene arginine/serine-rich protein PNISR Neighboring gene uncharacterized LOC17895514 Neighboring gene zinc finger protein VAR3, chloroplastic

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238922 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-arabinofuranosyltransferase RAY1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238922.1 Reference Caprub1_0

    Range
    10062869..10065617
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023787363.1 → XP_023643131.1  beta-arabinofuranosyltransferase RAY1

    UniProtKB/TrEMBL
    R0GC84
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases