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LOC17891061 probable galacturonosyltransferase 10 [ Capsella rubella ]

Gene ID: 17891061, updated on 21-Dec-2023

Summary

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Gene symbol
LOC17891061
Gene description
probable galacturonosyltransferase 10
Locus tag
CARUB_v10013424mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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See LOC17891061 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238921.1 (14933958..14935968)

NW_006238921.1Genomic Context describing neighboring genes Neighboring gene AP-5 complex subunit mu Neighboring gene external alternative NAD(P)H-ubiquinone oxidoreductase B4, mitochondrial Neighboring gene QWRF motif-containing protein 3 Neighboring gene uncharacterized LOC17891002

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238921 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 10
Names
AT2G20810-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238921.1 Reference Caprub1_0

    Range
    14933958..14935968
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006297339.2 → XP_006297401.1  probable galacturonosyltransferase 10

    See identical proteins and their annotated locations for XP_006297401.1

    UniProtKB/TrEMBL
    R0HKR7
    Conserved Domains (2) summary
    cd06429
    Location:228 → 523
    GT8_like_1; GT8_like_1 represents a subfamily of GT8 with unknown function
    PLN02742
    Location:1 → 535
    PLN02742; Probable galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases