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LOC17887891 cysteine synthase, chloroplastic/chromoplastic [ Capsella rubella ]

Gene ID: 17887891, updated on 21-Dec-2023

Summary

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Gene symbol
LOC17887891
Gene description
cysteine synthase, chloroplastic/chromoplastic
Locus tag
CARUB_v10025099mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
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Genomic context

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See LOC17887891 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238920.1 (13288104..13291038, complement)

NW_006238920.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111831013 Neighboring gene jacalin-related lectin 24 Neighboring gene molybdopterin synthase catalytic subunit Neighboring gene U5 small nuclear ribonucleoprotein 40 kDa protein Neighboring gene uncharacterized LOC17888299

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238920 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cysteine biosynthetic process from serine IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double fertilization forming a zygote and endosperm IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in pollen tube growth IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine synthase, chloroplastic/chromoplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238920.1 Reference Caprub1_0

    Range
    13288104..13291038 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006295895.2 → XP_006295957.1  cysteine synthase, chloroplastic/chromoplastic

    See identical proteins and their annotated locations for XP_006295957.1

    UniProtKB/TrEMBL
    R0HTV8
    Conserved Domains (2) summary
    PLN02565
    Location:71 → 388
    PLN02565; cysteine synthase
    cl00342
    Location:1 → 392
    Trp-synth-beta_II; Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan ...
Nucleotide Protein
Heading Accession and Version

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