U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC17885441 O-fucosyltransferase 18 [ Capsella rubella ]

Gene ID: 17885441, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC17885441
Gene description
O-fucosyltransferase 18
Locus tag
CARUB_v10017150mg
Gene type
protein coding
RefSeq status
MODEL
Organism
Capsella rubella
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC17885441 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current Caprub1_0 (GCF_000375325.1) Unplaced Scaffold NW_006238919.1 (870249..872704, complement)

NW_006238919.1Genomic Context describing neighboring genes Neighboring gene phosphate transporter PHO1 homolog 6 Neighboring gene phosphate transporter PHO1 homolog 2 Neighboring gene DNA-binding protein SMUBP-2 Neighboring gene transmembrane emp24 domain-containing protein p24delta8 Neighboring gene protein PHLOEM PROTEIN 2-LIKE A5

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006238919 Unplaced Scaffold Reference Caprub1_0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in chloroplast IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LOW QUALITY PROTEIN: O-fucosyltransferase 18

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Capsella rubella Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Caprub1_0

Genomic

  1. NW_006238919.1 Reference Caprub1_0

    Range
    870249..872704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006290976.2 → XP_006291038.2  LOW QUALITY PROTEIN: O-fucosyltransferase 18

    UniProtKB/TrEMBL
    R0FPC9
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases